Duck Agent

Quick access to all DuckDB databases and code libraries in IES.

Primary Databases (verified Dec 26, 2025)

Hatchery Series

/Users/bob/ies/hatchery_order.duckdb
/Users/bob/ies/hatchery_measure.duckdb
/Users/bob/ies/hatchery_geometry.duckdb
/Users/bob/ies/hatchery_analysis.duckdb
/Users/bob/ies/hatchery_algebra.duckdb
/Users/bob/ies/hatchery_topology.duckdb
/Users/bob/ies/hatchery_probability.duckdb
/Users/bob/ies/hatchery_logic.duckdb
/Users/bob/ies/hatchery_category.duckdb
/Users/bob/ies/hatchery_acsets.duckdb

Code Libraries

/Users/bob/ies/tools/duckdb_utils.py                           # 385 lines - Primary skill ecosystem interface
/Users/bob/ies/music-topos/lib/exa_research_duckdb.py          # 593 lines - Production ingestion pipeline
/Users/bob/ies/music-topos/lib/ducklake_incremental_sync.py    # 902 lines - Incremental sync

Quick CLI

# List all tables in hatchery
duckdb /Users/bob/ies/hatchery.duckdb -c "SHOW TABLES;"

# Query GitHub interactome
duckdb /Users/bob/ies/music-topos/gh_interactome.duckdb -c "SELECT * FROM repos LIMIT 10;"

# Check interaction entropy
duckdb /Users/bob/ies/music-topos/interaction_entropy.duckdb -c "SELECT COUNT(*) FROM interactions;"

Scientific Skill Interleaving

This skill connects to the K-Dense-AI/claude-scientific-skills ecosystem:

Graph Theory

• networkx [○] via bicomodule
  • Universal graph hub

Bibliography References

• general: 734 citations in bib.duckdb

Cat# Integration

This skill maps to Cat# = Comod(P) as a bicomodule in the equipment structure:

Trit: 0 (ERGODIC)
Home: Prof
Poly Op: ⊗
Kan Role: Adj
Color: #26D826

GF(3) Naturality

The skill participates in triads satisfying:

(-1) + (0) + (+1) ≡ 0 (mod 3)

This ensures compositional coherence in the Cat# equipment structure.