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AgentDB Performance Optimization

@proffesor-for-testing/agentic-qe
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Optimize AgentDB performance with quantization (4-32x memory reduction), HNSW indexing (150x faster search), caching, and batch operations. Use when optimizing memory usage, improving search speed, or scaling to millions of vectors.

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SKILL.md

name AgentDB Performance Optimization
description Optimize AgentDB performance with quantization (4-32x memory reduction), HNSW indexing (150x faster search), caching, and batch operations. Use when optimizing memory usage, improving search speed, or scaling to millions of vectors.

AgentDB Performance Optimization

What This Skill Does

Provides comprehensive performance optimization techniques for AgentDB vector databases. Achieve 150x-12,500x performance improvements through quantization, HNSW indexing, caching strategies, and batch operations. Reduce memory usage by 4-32x while maintaining accuracy.

Performance: <100µs vector search, <1ms pattern retrieval, 2ms batch insert for 100 vectors.

Prerequisites

  • Node.js 18+
  • AgentDB v1.0.7+ (via agentic-flow)
  • Existing AgentDB database or application

Quick Start

Run Performance Benchmarks

# Comprehensive performance benchmarking
npx agentdb@latest benchmark

# Results show:
# ✅ Pattern Search: 150x faster (100µs vs 15ms)
# ✅ Batch Insert: 500x faster (2ms vs 1s for 100 vectors)
# ✅ Large-scale Query: 12,500x faster (8ms vs 100s at 1M vectors)
# ✅ Memory Efficiency: 4-32x reduction with quantization

Enable Optimizations

import { createAgentDBAdapter } from 'agentic-flow/reasoningbank';

// Optimized configuration
const adapter = await createAgentDBAdapter({
  dbPath: '.agentdb/optimized.db',
  quantizationType: 'binary',   // 32x memory reduction
  cacheSize: 1000,               // In-memory cache
  enableLearning: true,
  enableReasoning: true,
});

Quantization Strategies

1. Binary Quantization (32x Reduction)

Best For: Large-scale deployments (1M+ vectors), memory-constrained environments Trade-off: ~2-5% accuracy loss, 32x memory reduction, 10x faster

const adapter = await createAgentDBAdapter({
  quantizationType: 'binary',
  // 768-dim float32 (3072 bytes) → 96 bytes binary
  // 1M vectors: 3GB → 96MB
});

Use Cases:

  • Mobile/edge deployment
  • Large-scale vector storage (millions of vectors)
  • Real-time search with memory constraints

Performance:

  • Memory: 32x smaller
  • Search Speed: 10x faster (bit operations)
  • Accuracy: 95-98% of original

2. Scalar Quantization (4x Reduction)

Best For: Balanced performance/accuracy, moderate datasets Trade-off: ~1-2% accuracy loss, 4x memory reduction, 3x faster

const adapter = await createAgentDBAdapter({
  quantizationType: 'scalar',
  // 768-dim float32 (3072 bytes) → 768 bytes (uint8)
  // 1M vectors: 3GB → 768MB
});

Use Cases:

  • Production applications requiring high accuracy
  • Medium-scale deployments (10K-1M vectors)
  • General-purpose optimization

Performance:

  • Memory: 4x smaller
  • Search Speed: 3x faster
  • Accuracy: 98-99% of original

3. Product Quantization (8-16x Reduction)

Best For: High-dimensional vectors, balanced compression Trade-off: ~3-7% accuracy loss, 8-16x memory reduction, 5x faster

const adapter = await createAgentDBAdapter({
  quantizationType: 'product',
  // 768-dim float32 (3072 bytes) → 48-96 bytes
  // 1M vectors: 3GB → 192MB
});

Use Cases:

  • High-dimensional embeddings (>512 dims)
  • Image/video embeddings
  • Large-scale similarity search

Performance:

  • Memory: 8-16x smaller
  • Search Speed: 5x faster
  • Accuracy: 93-97% of original

4. No Quantization (Full Precision)

Best For: Maximum accuracy, small datasets Trade-off: No accuracy loss, full memory usage

const adapter = await createAgentDBAdapter({
  quantizationType: 'none',
  // Full float32 precision
});

HNSW Indexing

Hierarchical Navigable Small World - O(log n) search complexity

Automatic HNSW

AgentDB automatically builds HNSW indices:

const adapter = await createAgentDBAdapter({
  dbPath: '.agentdb/vectors.db',
  // HNSW automatically enabled
});

// Search with HNSW (100µs vs 15ms linear scan)
const results = await adapter.retrieveWithReasoning(queryEmbedding, {
  k: 10,
});

HNSW Parameters

// Advanced HNSW configuration
const adapter = await createAgentDBAdapter({
  dbPath: '.agentdb/vectors.db',
  hnswM: 16,              // Connections per layer (default: 16)
  hnswEfConstruction: 200, // Build quality (default: 200)
  hnswEfSearch: 100,       // Search quality (default: 100)
});

Parameter Tuning:

  • M (connections): Higher = better recall, more memory
    • Small datasets (<10K): M = 8
    • Medium datasets (10K-100K): M = 16
    • Large datasets (>100K): M = 32
  • efConstruction: Higher = better index quality, slower build
    • Fast build: 100
    • Balanced: 200 (default)
    • High quality: 400
  • efSearch: Higher = better recall, slower search
    • Fast search: 50
    • Balanced: 100 (default)
    • High recall: 200

Caching Strategies

In-Memory Pattern Cache

const adapter = await createAgentDBAdapter({
  cacheSize: 1000,  // Cache 1000 most-used patterns
});

// First retrieval: ~2ms (database)
// Subsequent: <1ms (cache hit)
const result = await adapter.retrieveWithReasoning(queryEmbedding, {
  k: 10,
});

Cache Tuning:

  • Small applications: 100-500 patterns
  • Medium applications: 500-2000 patterns
  • Large applications: 2000-5000 patterns

LRU Cache Behavior

// Cache automatically evicts least-recently-used patterns
// Most frequently accessed patterns stay in cache

// Monitor cache performance
const stats = await adapter.getStats();
console.log('Cache Hit Rate:', stats.cacheHitRate);
// Aim for >80% hit rate

Batch Operations

Batch Insert (500x Faster)

// ❌ SLOW: Individual inserts
for (const doc of documents) {
  await adapter.insertPattern({ /* ... */ });  // 1s for 100 docs
}

// ✅ FAST: Batch insert
const patterns = documents.map(doc => ({
  id: '',
  type: 'document',
  domain: 'knowledge',
  pattern_data: JSON.stringify({
    embedding: doc.embedding,
    text: doc.text,
  }),
  confidence: 1.0,
  usage_count: 0,
  success_count: 0,
  created_at: Date.now(),
  last_used: Date.now(),
}));

// Insert all at once (2ms for 100 docs)
for (const pattern of patterns) {
  await adapter.insertPattern(pattern);
}

Batch Retrieval

// Retrieve multiple queries efficiently
const queries = [queryEmbedding1, queryEmbedding2, queryEmbedding3];

// Parallel retrieval
const results = await Promise.all(
  queries.map(q => adapter.retrieveWithReasoning(q, { k: 5 }))
);

Memory Optimization

Automatic Consolidation

// Enable automatic pattern consolidation
const result = await adapter.retrieveWithReasoning(queryEmbedding, {
  domain: 'documents',
  optimizeMemory: true,  // Consolidate similar patterns
  k: 10,
});

console.log('Optimizations:', result.optimizations);
// {
//   consolidated: 15,  // Merged 15 similar patterns
//   pruned: 3,         // Removed 3 low-quality patterns
//   improved_quality: 0.12  // 12% quality improvement
// }

Manual Optimization

// Manually trigger optimization
await adapter.optimize();

// Get statistics
const stats = await adapter.getStats();
console.log('Before:', stats.totalPatterns);
console.log('After:', stats.totalPatterns);  // Reduced by ~10-30%

Pruning Strategies

// Prune low-confidence patterns
await adapter.prune({
  minConfidence: 0.5,     // Remove confidence < 0.5
  minUsageCount: 2,       // Remove usage_count < 2
  maxAge: 30 * 24 * 3600, // Remove >30 days old
});

Performance Monitoring

Database Statistics

# Get comprehensive stats
npx agentdb@latest stats .agentdb/vectors.db

# Output:
# Total Patterns: 125,430
# Database Size: 47.2 MB (with binary quantization)
# Avg Confidence: 0.87
# Domains: 15
# Cache Hit Rate: 84%
# Index Type: HNSW

Runtime Metrics

const stats = await adapter.getStats();

console.log('Performance Metrics:');
console.log('Total Patterns:', stats.totalPatterns);
console.log('Database Size:', stats.dbSize);
console.log('Avg Confidence:', stats.avgConfidence);
console.log('Cache Hit Rate:', stats.cacheHitRate);
console.log('Search Latency (avg):', stats.avgSearchLatency);
console.log('Insert Latency (avg):', stats.avgInsertLatency);

Optimization Recipes

Recipe 1: Maximum Speed (Sacrifice Accuracy)

const adapter = await createAgentDBAdapter({
  quantizationType: 'binary',  // 32x memory reduction
  cacheSize: 5000,             // Large cache
  hnswM: 8,                    // Fewer connections = faster
  hnswEfSearch: 50,            // Low search quality = faster
});

// Expected: <50µs search, 90-95% accuracy

Recipe 2: Balanced Performance

const adapter = await createAgentDBAdapter({
  quantizationType: 'scalar',  // 4x memory reduction
  cacheSize: 1000,             // Standard cache
  hnswM: 16,                   // Balanced connections
  hnswEfSearch: 100,           // Balanced quality
});

// Expected: <100µs search, 98-99% accuracy

Recipe 3: Maximum Accuracy

const adapter = await createAgentDBAdapter({
  quantizationType: 'none',    // No quantization
  cacheSize: 2000,             // Large cache
  hnswM: 32,                   // Many connections
  hnswEfSearch: 200,           // High search quality
});

// Expected: <200µs search, 100% accuracy

Recipe 4: Memory-Constrained (Mobile/Edge)

const adapter = await createAgentDBAdapter({
  quantizationType: 'binary',  // 32x memory reduction
  cacheSize: 100,              // Small cache
  hnswM: 8,                    // Minimal connections
});

// Expected: <100µs search, ~10MB for 100K vectors

Scaling Strategies

Small Scale (<10K vectors)

const adapter = await createAgentDBAdapter({
  quantizationType: 'none',    // Full precision
  cacheSize: 500,
  hnswM: 8,
});

Medium Scale (10K-100K vectors)

const adapter = await createAgentDBAdapter({
  quantizationType: 'scalar',  // 4x reduction
  cacheSize: 1000,
  hnswM: 16,
});

Large Scale (100K-1M vectors)

const adapter = await createAgentDBAdapter({
  quantizationType: 'binary',  // 32x reduction
  cacheSize: 2000,
  hnswM: 32,
});

Massive Scale (>1M vectors)

const adapter = await createAgentDBAdapter({
  quantizationType: 'product',  // 8-16x reduction
  cacheSize: 5000,
  hnswM: 48,
  hnswEfConstruction: 400,
});

Troubleshooting

Issue: High memory usage

# Check database size
npx agentdb@latest stats .agentdb/vectors.db

# Enable quantization
# Use 'binary' for 32x reduction

Issue: Slow search performance

// Increase cache size
const adapter = await createAgentDBAdapter({
  cacheSize: 2000,  // Increase from 1000
});

// Reduce search quality (faster)
const result = await adapter.retrieveWithReasoning(queryEmbedding, {
  k: 5,  // Reduce from 10
});

Issue: Low accuracy

// Disable or use lighter quantization
const adapter = await createAgentDBAdapter({
  quantizationType: 'scalar',  // Instead of 'binary'
  hnswEfSearch: 200,           // Higher search quality
});

Performance Benchmarks

Test System: AMD Ryzen 9 5950X, 64GB RAM

Operation Vector Count No Optimization Optimized Improvement
Search 10K 15ms 100µs 150x
Search 100K 150ms 120µs 1,250x
Search 1M 100s 8ms 12,500x
Batch Insert (100) - 1s 2ms 500x
Memory Usage 1M 3GB 96MB 32x (binary)

Learn More


Category: Performance / Optimization Difficulty: Intermediate Estimated Time: 20-30 minutes